From d4387e8eacace6704db52d0d33e5d6ea9ed2da35 Mon Sep 17 00:00:00 2001
From: "Kurt A. O'Hearn" <ohearnku@msu.edu>
Date: Thu, 4 Oct 2018 11:22:11 -0700
Subject: [PATCH] Tools: fix MPI command. Change control file generation to be
in running directory (for temporary directories and files) => necessary for
running with MPI (shared filesystem needed across nodes).
---
tools/run_sim_puremd.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/tools/run_sim_puremd.py b/tools/run_sim_puremd.py
index c5fafffa..d1c84dec 100644
--- a/tools/run_sim_puremd.py
+++ b/tools/run_sim_puremd.py
@@ -155,7 +155,7 @@ class TestCase():
+ '_pa' + param_dict['cm_solver_pre_app_type'] \
+ '_paji'+ str(param_dict['cm_solver_pre_app_jacobi_iters'])
- temp_dir = mkdtemp()
+ temp_dir = mkdtemp(dir=getcwd())
temp_file = path.join(temp_dir, path.basename(self.__control_file))
# add MPI execution arguments to subprocess argument list
@@ -491,4 +491,4 @@ if __name__ == '__main__':
for test in test_cases:
test.run(binary, process_results=args.process_results,
- mpi_cmd=args.mpi_cmd.split(':'))
+ mpi_cmd=args.mpi_cmd[0].split(':'))
--
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