PG-PuReMD: only perform device-side reductions on energy at requested update...
PG-PuReMD: only perform device-side reductions on energy at requested update energy frequency. Fix trajectory file output. Add num. retries of main simulation loop to log file. Other refactoring.
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- PG-PuReMD/src/cuda/cuda_allocate.cu 0 additions, 5 deletionsPG-PuReMD/src/cuda/cuda_allocate.cu
- PG-PuReMD/src/cuda/cuda_copy.cu 6 additions, 5 deletionsPG-PuReMD/src/cuda/cuda_copy.cu
- PG-PuReMD/src/cuda/cuda_forces.cu 89 additions, 322 deletionsPG-PuReMD/src/cuda/cuda_forces.cu
- PG-PuReMD/src/cuda/cuda_init_md.cu 1 addition, 7 deletionsPG-PuReMD/src/cuda/cuda_init_md.cu
- PG-PuReMD/src/cuda/cuda_nonbonded.cu 160 additions, 118 deletionsPG-PuReMD/src/cuda/cuda_nonbonded.cu
- PG-PuReMD/src/cuda/cuda_utils.h 1 addition, 1 deletionPG-PuReMD/src/cuda/cuda_utils.h
- PG-PuReMD/src/forces.c 1 addition, 1 deletionPG-PuReMD/src/forces.c
- PG-PuReMD/src/io_tools.c 20 additions, 18 deletionsPG-PuReMD/src/io_tools.c
- PG-PuReMD/src/list.h 2 additions, 2 deletionsPG-PuReMD/src/list.h
- PG-PuReMD/src/parallelreax.c 18 additions, 101 deletionsPG-PuReMD/src/parallelreax.c
- PG-PuReMD/src/reax_types.h 5 additions, 3 deletionsPG-PuReMD/src/reax_types.h
- PG-PuReMD/src/reset_tools.c 2 additions, 1 deletionPG-PuReMD/src/reset_tools.c
- PG-PuReMD/src/tool_box.c 1 addition, 1 deletionPG-PuReMD/src/tool_box.c
- PG-PuReMD/src/traj.c 3 additions, 5 deletionsPG-PuReMD/src/traj.c
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