Commits · a545435260689902bf67da97d049a6156e645912 · SParTA / PuReMD

Jul 29, 2016
- Begin merging PuReMD and PG-PuReMD codes to enable MPI-only in PG-PuReMD. · a5454352
  Kurt A. O'Hearn authored 8 years ago
  
  a5454352
Jul 28, 2016
- Rename benchmark. Fix SuperLU-MT build. Update benchmark script. · c1b5ea81
  Kurt A. O'Hearn authored 8 years ago
  
  c1b5ea81
Jul 25, 2016
- Merge branch 'master' of gitlab.msu.edu:SParTA/PuReMD · 78769c1f
  Kurt A. O'Hearn authored 8 years ago
  
  78769c1f
- Update autotools defaults. · 8c8b0017
  Kurt A. O'Hearn authored 8 years ago
  
  8c8b0017
Jul 20, 2016

sPuReMD: fix SuperLU build and code. Fix ILU_PAR (compute factors separately).... · 5475712f

Kurt A. O'Hearn authored 8 years ago

sPuReMD: fix SuperLU build and code. Fix ILU_PAR (compute factors separately). Move diagonal preconditioner computation. Refactor precondition computations. General code clean-up.

5475712f

Jul 01, 2016
- Update benchmarks. · 0c9bb582
  Kurt A. O'Hearn authored 8 years ago
  
  0c9bb582
- Merge branch 'master' of gitlab.msu.edu:SParTA/PuReMD. · f33a5b4f
  Kurt A. O'Hearn authored 8 years ago
  
  f33a5b4f
- Update CUDA block calculations. · 52199731
  Kurt A. O'Hearn authored 8 years ago
  
  52199731
- sPuReMD: add support for SuperLU MT. · fe3c2d58
  Kurt A. O'Hearn authored 8 years ago
  
  fe3c2d58
- Add more tools. Update water benchmark. · 028c7bc9
  Kurt A. O'Hearn authored 8 years ago
  
  028c7bc9
Jun 30, 2016
- Tools: begin combining geo tools into Python code. · 11811c5e
  Kurt A. O'Hearn authored 8 years ago
  
  11811c5e
Jun 28, 2016
- Add manual source and build rules. · ef955ef5
  Kurt A. O'Hearn authored 8 years ago
  
  ef955ef5
Jun 27, 2016
- Refactor CUDA storage initialization. · 541940e8
  Kurt A. O'Hearn authored 8 years ago
  
  541940e8
Jun 21, 2016
- Explicity set enum values. · 88625f2e
  Kurt A. O'Hearn authored 8 years ago
  
  88625f2e
Jun 20, 2016
- More code formatting. · bb006b44
  Kurt A. O'Hearn authored 8 years ago
  
  bb006b44
- Code formatting. · 527b0b85
  Kurt A. O'Hearn authored 8 years ago
  
  527b0b85
- Update PETN benchmark. · 8bbd8cf3
  Kurt A. O'Hearn authored 8 years ago
  
  8bbd8cf3
- Merge branch 'master' of gitlab.msu.edu:SParTA/PuReMD · 43a3c3a8
  Kurt A. O'Hearn authored 8 years ago
  
  43a3c3a8
- Refactor MPI only and MPI+GPU code. · 4f9c2b53
  Kurt A. O'Hearn authored 8 years ago
  
  4f9c2b53
Jun 18, 2016
- Directory reorganization. Update simulation runner paths. · 8fe7397e
  Kurt A. O'Hearn authored 8 years ago
  
  8fe7397e
Jun 17, 2016
- Autotools: refactor build system output. Begin fixing PuReMD-GPU. · e84cf0a8
  Kurt A. O'Hearn authored 8 years ago
  
  e84cf0a8
Jun 16, 2016
- Fix bilayer and dna benchmarks. Add NaN support for checking sim box boundaries in PuReMD. · ca8bbe17
  Kurt A. O'Hearn authored 8 years ago
  
  ca8bbe17
- More benchmark changes. · b18467fd
  Kurt A. O'Hearn authored 8 years ago
  
  b18467fd
- Update benchmarks. · 1c247877
  Kurt A. O'Hearn authored 8 years ago
  
  1c247877
Jun 14, 2016
- Autotools: add support for compiling shared sources between NVCC and CC trajectories. · 3de10e33
  Kurt A. O'Hearn authored 8 years ago
  
  3de10e33
Jun 12, 2016
- Fix CUDA build rules. Remove generated headers. Update .gitignore. · 35ba166d
  Kurt A. O'Hearn authored 8 years ago
  
  35ba166d
- Enable silent builds for custom rules. · ed565fee
  Kurt A. O'Hearn authored 8 years ago
  
  ed565fee
- Autotools: enable silent builds by default. · 8eab3316
  Kurt A. O'Hearn authored 8 years ago
  
  8eab3316
- Refactor build system to conditionally enable CUDA support in PG-PuReMD. · 84822808
  Kurt A. O'Hearn authored 8 years ago
  
  84822808
Jun 09, 2016
- Remove b from shared clause: predetermined shared with recent GCC, which results in error. · a4a5aeff
  Kurt A. O'Hearn authored 8 years ago
  
  a4a5aeff
- Merge branch 'autotools' · 138b87c8
  Kurt A. O'Hearn authored 8 years ago
  
  138b87c8
- Update .gitignore. · 11a72ccd
  Kurt A. O'Hearn authored 8 years ago
  
  11a72ccd
- Add CUDA support. · 7d60aa89
  Kurt A. O'Hearn authored 8 years ago
  
  7d60aa89
Jun 07, 2016
- Fix variable exporting to configure subdirs. Fix top level build options. Add MPI support. · 83df3063
  Kurt A. O'Hearn authored 8 years ago
  
  83df3063
Jun 03, 2016
- Add benchmark data. · aa94323b
  Kurt A. O'Hearn authored 8 years ago
  
  aa94323b
May 31, 2016
- Update README. · bdfc799c
  Kurt A. O'Hearn authored 8 years ago
  
  bdfc799c
May 30, 2016
- Add MPI and CUDA builds. · 2ea46a11
  Kurt A. O'Hearn authored 8 years ago
  
  2ea46a11
May 19, 2016
- sPuReMD: more config parameter refactoring (Jacobi iterations). · b471f953
  Kurt A. O'Hearn authored 8 years ago
  
  b471f953
- sPuReMD: refactor config file options for QEq solver, preconditioner, etc. · b4aead31
  Kurt A. O'Hearn authored 8 years ago
  
  b4aead31
May 18, 2016
- sPuReMD: inline SpMV and vector addition in Jacobi iteration routine to avoid... · 6423101f
  Kurt A. O'Hearn authored 8 years ago
  
  sPuReMD: inline SpMV and vector addition in Jacobi iteration routine to avoid thread management overhead (per loop iteration).
  6423101f