Delete test_pk2Comp.py

pk_optimizer/test/test_pk2Comp.py

-# -*- coding: utf-8 -*-
-"""
-Created on Thu Feb 27 16:26:32 2020
-
-@author: Ethan
-"""
-
-from scipy.integrate import odeint 
-import pk2Comp
-import pytest
-
-def test_pkOptimizer_init():
-    
-    pk1 = pk2Comp.pk2Comp()
-    #Test directory is same as one given
-    assert pk1.numParam == 4
-    assert pk1.flow == 1/60
-    assert pk1.Vp == 0.05
-    assert pk1.Visf == 0.15
-    assert pk1.PS == 1/60
-    assert pk1.Cp0 == 0 # Initial concentration of tracer in plasma
-    assert pk1.Cisf0 == 0 # Initial concentration of tracer in plasma
-    assert pk1.tmax == 10 #Time in seconds
-    assert pk1.dt == 1 #Time step
-    assert pk1.a == 2. # Alpha for gamma distribution
-    assert pk1.sol == []    
-
-def test_pkOptimizer_init_newVals():
-    
-    pk2 = pk2Comp.pk2Comp(5, 1.15, 1/60, 2.3/60, 7)
-    #Test directory is same as one given
-    assert pk2.numParam == 5
-    assert pk2.flow == 1.15
-    assert pk2.Vp == 1/60
-    assert pk2.Visf == 2.3/60
-    assert pk2.PS == 7 # Initial concentration of tracer in plasma
-    
-def test_pkOptimizer_init_badVals0():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(-5, 1.15, 1/60, 2.3/60)
-    assert "Input values are incorrect." in str(excinfo.value)
-def test_pkOptimizer_init_badVals1():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(5, -1.15, 1/60, 2.3/60)
-    assert "Input values are incorrect." in str(excinfo.value)
-def test_pkOptimizer_init_badVals2():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(5, 1.15, -1/60, 2.3/60)
-    assert "Input values are incorrect." in str(excinfo.value)
-def test_pkOptimizer_init_badVals3():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(-5, 1.15, 1/60, -2.3/60)
-    assert "Input values are incorrect." in str(excinfo.value)
-def test_pkOptimizer_init_badVals4():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(5, 1.15, 1/60, 60)
-    assert "Input values are incorrect." in str(excinfo.value)
-def test_pkOptimizer_init_badVals5():
-    with pytest.raises(ValueError) as excinfo:
-        pk3 = pk2Comp.pk2Comp(5, 1.15, 60, 2.3/60)
-    assert "Input values are incorrect." in str(excinfo.value)
-    
-def test_main():
-    pk1 = pk2Comp.pk2Comp()
-    pk1.main()
-    pk2 = pk2Comp.pk2Comp(5, 1.15, 1/60, 2.3/60)
-    pk2.main()
-    assert 1 == 1
-
-def test_derivs():
-    pk1 = pk2Comp.pk2Comp()
-    ssol = odeint(pk1.derivs, [0,0], pk1.time)
-    assert ssol[:,0].max().round(3) == 0.151
-    
-    ssol = odeint(pk1.derivs, [1,0], pk1.time)
-    assert ssol[:,0].max().round(3) == 1.0
-    
-    ssol = odeint(pk1.derivs, [0,1], pk1.time)
-    assert ssol[:,0].max().round(3) == 0.526
-    
-    ssol = odeint(pk1.derivs, [-2,0], pk1.time)
-    assert ssol[:,0].max().round(3) == -0.08
-    
-    ssol = odeint(pk1.derivs, [0,-2], pk1.time)
-    assert ssol[:,0].max().round(3) == 0.0
-    
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